2M8V Antibiotic date May 29, 2013
title Solution Structure And Activity Study Of Bovicin Hj50, A Par Type Aii Lantibiotic
authors J.Zhang, Y.Feng, J.Wang, J.Zhong
compound source
Molecule: Bova
Chain: A
Fragment: Unp Residues 26-58
Synonym: Bovicin Hj50
Engineered: Yes
 Organism_scientific: Streptococcus Equinus
Organism_taxid: 1335
Strain: Hj50
Gene: Bova
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet-Bovam
methodSolution NMR
ligand DBB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceType AII Lantibiotic Bovicin HJ50 with a Rare Disulfide Bond: Structure, Structure-Activity Relationships and Mode of Action., Zhang J, Feng Y, Teng K, Lin Y, Gao Y, Wang J, Zhong J, Biochem J. 2014 May 12. PMID:24814218
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (158 Kb) [Save to disk]
  • Biological Unit Coordinates (2m8v.pdb1.gz) 8 Kb
  • LPC: Ligand-Protein Contacts for 2M8V
  • CSU: Contacts of Structural Units for 2M8V
  • Original NMR restraints for 2M8V from PDB
  • Retrieve 2M8V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M8V from S2C, [Save to disk]
    • View 2M8V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2M8V
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2M8V, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m8v] [2m8v_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2M8V
  • Community annotation for 2M8V at PDBWiki (http://pdbwiki.org)

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