2M9Y Solution Structure of the Catalytic Domain of HHARI date
authors Mercier, P., Spratt, D.E., Shaw, G.S.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the HHARI catalytic domain shows glimpses of a HECT E3 ligase., Spratt DE, Mercier P, Shaw GS, PLoS One. 2013 Aug 15;8(8):e74047. doi: 10.1371/journal.pone.0074047. PMID:24058416
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (364 Kb) [Save to disk]
  • Biological Unit Coordinates (2m9y.pdb1.gz) 19 Kb
  • LPC: Ligand-Protein Contacts for 2M9Y
  • CSU: Contacts of Structural Units for 2M9Y
  • Original NMR restraints for 2M9Y from PDB
  • Retrieve 2M9Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M9Y from S2C, [Save to disk]
  • View 2M9Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2M9Y
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2M9Y, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m9y] [2m9y_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2M9Y: [IBR ] by SMART
  • Other resources with information on 2M9Y
  • Community annotation for 2M9Y at PDBWiki (http://pdbwiki.org)

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