2MHY Signaling Protein date Dec 05, 2013
title Structure Determination Of The Salamander Courtship Pheromon Plethodontid Modulating Factor
authors D.B.Wilburn, K.E.Bowen, K.A.Doty, S.Arumugam, A.N.Lane, P.W.Feldh R.C.Feldhoff
compound source
Molecule: Plethodontid Modulating Factor
Chain: A
Fragment: Unp Residues 20-76
Engineered: Yes
 Organism_scientific: Plethodon Shermani
Organism_common: Sherman Salamander
Organism_taxid: 263671
Expression_system: Komagataella Pastoris
Expression_system_common: 4922
Expression_system_taxid: 4922
Expression_system_strain: Km71h
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ppiczalphaa
methodSolution NMR
Primary referenceStructural insights into the evolution of a sexy protein: novel topology and restricted backbone flexibility in a hypervariable pheromone from the red-legged salamander, Plethodon shermani., Wilburn DB, Bowen KE, Doty KA, Arumugam S, Lane AN, Feldhoff PW, Feldhoff RC, PLoS One. 2014 May 21;9(5):e96975. doi: 10.1371/journal.pone.0096975. eCollection, 2014. PMID:24849290
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (308 Kb) [Save to disk]
  • Biological Unit Coordinates (2mhy.pdb1.gz) 16 Kb
  • CSU: Contacts of Structural Units for 2MHY
  • Original NMR restraints for 2MHY from PDB
  • Retrieve 2MHY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2MHY from S2C, [Save to disk]
    • View 2MHY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2MHY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2MHY, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2mhy_A] [2mhy]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2MHY
  • Community annotation for 2MHY at PDBWiki (http://pdbwiki.org)

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