2MJ9 Toxin date Dec 30, 2013
title Designed Exendin-4 Analogues
authors P.Rovo, V.Farkas, P.Straner, M.Szabo, A.Jermendy, O.Hegyi, G.K.Tot A.Perczel
compound source
Molecule: Exendin-4
Chain: A
Engineered: Yes
Organism_scientific: Heloderma Suspectum
Organism_common: Gila Monster
Organism_taxid: 8554
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Vector
Expression_system_vector: Pubk2
methodSolution NMR
ligand DAL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceRational Design of alpha-Helix-Stabilized Exendin-4 Analogues., Rovo P, Farkas V, Straner P, Szabo M, Jermendy A, Hegyi O, Toth GK, Perczel A, Biochemistry. 2014 May 28. PMID:24828921
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk]
  • Biological Unit Coordinates (2mj9.pdb1.gz) 10 Kb
  • LPC: Ligand-Protein Contacts for 2MJ9
  • CSU: Contacts of Structural Units for 2MJ9
  • Original NMR restraints for 2MJ9 from PDB
  • Retrieve 2MJ9 in mmCIF format [Save to disk]
  • View 2MJ9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2MJ9
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2MJ9, from MSDmotif at EBI
  • Fold representative 2mj9 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2mj9] [2mj9_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2MJ9: [GLUCA ] by SMART
  • Other resources with information on 2MJ9
  • Community annotation for 2MJ9 at PDBWiki (http://pdbwiki.org)

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