2MJV Transcription date Jan 16, 2014
title Solution Structures Of Second Bromodomain Of Brd4 With Di-Ac Twist Peptide
authors L.Zeng, M.Zhou
compound source
Molecule: Twist-Related Protein 1
Chain: A
Fragment: Peptide (Unp Residues 68-79)
Synonym: Class A Basic Helix-Loop-Helix Protein 38, Bhlha38
Engineered: Yes

Molecule: Bromodomain-Containing Protein 4
Chain: B
Fragment: Bromodomain 2 (Unp Residues 333-460)
Synonym: Brd4, Protein Hunk1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Brd4, Hunk1
methodSolution NMR
ligand ALY enzyme
Primary referenceDisrupting the Interaction of BRD4 with Diacetylated Twist Suppresses Tumorigenesis in Basal-like Breast Cancer., Shi J, Wang Y, Zeng L, Wu Y, Deng J, Zhang Q, Lin Y, Li J, Kang T, Tao M, Rusinova E, Zhang G, Wang C, Zhu H, Yao J, Zeng YX, Evers BM, Zhou MM, Zhou BP, Cancer Cell. 2014 Feb 10;25(2):210-25. doi: 10.1016/j.ccr.2014.01.028. PMID:24525235
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (749 Kb) [Save to disk]
  • Biological Unit Coordinates (2mjv.pdb1.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 2MJV
  • CSU: Contacts of Structural Units for 2MJV
  • Original NMR restraints for 2MJV from PDB
  • Retrieve 2MJV in mmCIF format [Save to disk]
  • View 2MJV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2MJV
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2MJV, from MSDmotif at EBI
  • Fold representative 2mjv from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2mjv_A] [2mjv_B] [2mjv]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2MJV: [BROMO ] by SMART
  • Other resources with information on 2MJV
  • Community annotation for 2MJV at PDBWiki (http://pdbwiki.org)

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