2MPS Ligase Peptide date Jun 02, 2014
title Structure Of Complex Of Mdm2(3-109) And P73 Tad(10-25)
authors J.S.Shin, J.H.Ha, S.W.Chi
compound source
Molecule: E3 Ubiquitin-Protein Ligase Mdm2
Chain: A
Fragment: Unp Residues 3-109
Synonym: Double Minute 2 Protein, Hdm2, Oncoprotein Mdm2, P Protein Mdm2;
Ec: 6.3.2.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mdm2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet

Molecule: Tumor Protein P73
Chain: B
Fragment: Unp Residues 10-25
Synonym: P53-Like Transcription Factor, P53-Related Protein
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: P73, Tp73
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet
methodSolution NMR
ligand
enzyme Ligase E.C.6.3.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural convergence of unstructured p53 family transactivation domains in MDM2 recognition., Shin JS, Ha JH, Lee DH, Ryu KS, Bae KH, Park BC, Park SG, Yi GS, Chi SW, Cell Cycle. 2015;14(4):533-43. doi: 10.1080/15384101.2014.998056. PMID:25591003
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (776 Kb) [Save to disk]
  • Biological Unit Coordinates (2mps.pdb1.gz) 40 Kb
  • CSU: Contacts of Structural Units for 2MPS
  • Original NMR restraints for 2MPS from PDB
  • Retrieve 2MPS in mmCIF format [Save to disk]
  • View 2MPS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2MPS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2MPS, from MSDmotif at EBI
  • Fold representative 2mps from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2mps] [2mps_A] [2mps_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2MPS
  • Community annotation for 2MPS at PDBWiki (http://pdbwiki.org)

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