2MSG Signaling Protein date Aug 04, 2014
title Solid-State Nmr Structure Of Ubiquitin
authors N.Lakomek, B.Habenstein, A.Loquet, C.Shi, K.Giller, S.Wolff, S.Bec H.Fasshuber, A.Lange
compound source
Molecule: Ubiquitin
Chain: A
Fragment: Unp Residuse 1-72
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pet32a
methodSolid-State NMR
Primary referenceStructural heterogeneity in microcrystalline ubiquitin studied by solid-state NMR., Fasshuber HK, Lakomek NA, Habenstein B, Loquet A, Shi C, Giller K, Wolff S, Becker S, Lange A, Protein Sci. 2015 Feb 2. doi: 10.1002/pro.2654. PMID:25644665
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (193 Kb) [Save to disk]
  • Biological Unit Coordinates (2msg.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 2MSG
  • Original NMR restraints for 2MSG from PDB
  • Retrieve 2MSG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2MSG from S2C, [Save to disk]
    • View 2MSG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2MSG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2MSG, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2msg_A] [2msg]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2MSG: [UBQ ] by SMART
    • Other resources with information on 2MSG
  • Community annotation for 2MSG at PDBWiki (http://pdbwiki.org)

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