2MWI Protein Binding date Nov 11, 2014
title The Structure Of The Carboxy-Terminal Domain Of Dnttip1
authors J.W.R.Schwabe, F.W.Muskett, T.Itoh
compound source
Molecule: Deoxynucleotidyltransferase Terminal-Interacting
Chain: A
Fragment: Carboxy-Terminal Domain (Unp Residues 197-316)
Synonym: Terminal Deoxynucleotidyltransferase-Interacting F Tdif1, Tdt-Interacting Factor 1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Dnttip1, C20orf167, Tdif1
Expression_system: Escherichia Coli
Expression_system_taxid: 866768
Expression_system_strain: Rosetta Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet30a
methodSolution NMR
Primary referenceStructural and functional characterization of a cell cycle associated HDAC1/2 complex reveals the structural basis for complex assembly and nucleosome targeting., Itoh T, Fairall L, Muskett FW, Milano CP, Watson PJ, Arnaudo N, Saleh A, Millard CJ, El-Mezgueldi M, Martino F, Schwabe JW, Nucleic Acids Res. 2015 Feb 4. pii: gkv068. PMID:25653165
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2513 Kb) [Save to disk]
  • Biological Unit Coordinates (2mwi.pdb1.gz) 40 Kb
  • CSU: Contacts of Structural Units for 2MWI
  • Original NMR restraints for 2MWI from PDB
  • Retrieve 2MWI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2MWI from S2C, [Save to disk]
  • View 2MWI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2MWI
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2MWI, from MSDmotif at EBI
  • Fold representative 2mwi from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2mwi_A] [2mwi]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2MWI
  • Community annotation for 2MWI at PDBWiki (http://pdbwiki.org)

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