2MXY Rna Binding Protein Rna date Jan 19, 2015
title Solution Structure Of Hnrnp C Rrm In Complex With 5'-Auuuuuc
authors Z.Cienikova, F.F.Damberger, J.Hall, F.H.T.Allain, C.Maris
compound source
Molecule: Heterogeneous Nuclear Ribonucleoproteins C1c2
Chain: A
Fragment: Rrm (Unp Residues 2-106)
Synonym: Hnrnp C1c2, Hnrnp_c
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hnrnpc, Hnrpc
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ptyb11

Molecule: 5'-R(Apupupupupupc)-3'
Chain: B
Engineered: Yes

Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and mechanistic insights into poly(uridine) tract recognition by the hnRNP C RNA recognition motif., Cienikova Z, Damberger FF, Hall J, Allain FH, Maris C, J Am Chem Soc. 2014 Oct 15;136(41):14536-44. doi: 10.1021/ja507690d. Epub 2014, Sep 30. PMID:25216038
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (606 Kb) [Save to disk]
  • Biological Unit Coordinates (2mxy.pdb1.gz) 31 Kb
  • CSU: Contacts of Structural Units for 2MXY
  • Original NMR restraints for 2MXY from PDB
  • Retrieve 2MXY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2MXY from S2C, [Save to disk]
  • View 2MXY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2MXY
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2MXY, from MSDmotif at EBI
  • Fold representative 2mxy from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2mxy] [2mxy_B] [2mxy_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2MXY: [RRM ] by SMART
  • Other resources with information on 2MXY
  • Community annotation for 2MXY at PDBWiki (http://pdbwiki.org)

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