2MZI Hydrolase date Feb 12, 2015
title Nmr Solution Structure Of The Pro Form Of Human Matrilysin ( In Complex With Anionic Membrane
authors S.H.Prior, S.R.Van Doren
compound source
Molecule: Matrilysin
Chain: A
Synonym: Matrin, Matrix Metalloproteinase-7, Mmp-7, Pump-1 Uterine Metalloproteinase;
Ec: 3.4.24.23
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mmp7, Mpsl1, Pump1
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector: Pet28-A
methodSolution NMR
ligand C3S, CA, PX4, ZN enzyme Hydrolase E.C.3.4.24.23 BRENDA
subcellular loc. Membrane localization by OPM: Secreted
out side
in side
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCharge-Triggered Membrane Insertion of Matrix Metalloproteinase-7, Supporter of Innate Immunity and Tumors., Prior SH, Fulcher YG, Koppisetti RK, Jurkevich A, Van Doren SR, Structure. 2015 Nov 3;23(11):2099-110. doi: 10.1016/j.str.2015.08.013. Epub 2015 , Oct 1. PMID:26439767
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (3427 Kb) [Save to disk]
  • Biological Unit Coordinates (2mzi.pdb1.gz) 173 Kb
  • LPC: Ligand-Protein Contacts for 2MZI
  • CSU: Contacts of Structural Units for 2MZI
  • Original NMR restraints for 2MZI from PDB
  • Retrieve 2MZI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2MZI from S2C, [Save to disk]
  • View 2MZI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2MZI
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 2mzi from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2mzi_A] [2mzi]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2MZI: [ZnMc ] by SMART
  • Other resources with information on 2MZI
  • Community annotation for 2MZI at PDBWiki (http://pdbwiki.org)

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