2N1T Dynamic binding mode of a synaptotagmin-1-SNARE complex in solution date
authors Brewer, K., Bacaj, T., Cavalli, A., Camilloni, C., Swarbrick, J., Liu, J., Zhou, A., Zhou, P., Barlow, N., Xu, J., Seven, A., Prinslow, E., Voleti, R., Haussinger, D., Bonvin, A., Tomchick, D., Vendruscolo, M., Graham, B., Sudhof, T., Rizo, J.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A


B


D, C


E


Primary referenceDynamic binding mode of a Synaptotagmin-1-SNARE complex in solution., Brewer KD, Bacaj T, Cavalli A, Camilloni C, Swarbrick JD, Liu J, Zhou A, Zhou P, Barlow N, Xu J, Seven AB, Prinslow EA, Voleti R, Haussinger D, Bonvin AM, Tomchick DR, Vendruscolo M, Graham B, Sudhof TC, Rizo J, Nat Struct Mol Biol. 2015 Jun 1. doi: 10.1038/nsmb.3035. PMID:26030874
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (615 Kb) [Save to disk]
  • Biological Unit Coordinates (2n1t.pdb1.gz) 120 Kb
  • CSU: Contacts of Structural Units for 2N1T
  • Original NMR restraints for 2N1T from PDB
  • Retrieve 2N1T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2N1T from S2C, [Save to disk]
    • View 2N1T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2N1T
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2N1T, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2n1t_C] [2n1t_E] [2n1t] [2n1t_B] [2n1t_A] [2n1t_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 2N1T: [C2] [t_SNARE ] by SMART
    • Other resources with information on 2N1T
  • Community annotation for 2N1T at PDBWiki (http://pdbwiki.org)

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