2N97 Signaling Protein date Nov 07, 2015
title Dd Homodimer
authors Z.Lin, C.F.Ibanez
compound source
Molecule: Tumor Necrosis Factor Receptor Superfamily Member
Chain: A, B
Fragment: Unp Residues 334-427
Synonym: Gp80-Lngfr, Low Affinity Neurotrophin Receptor P75 Affinity Nerve Growth Factor Receptor, Ngf Receptor, P75 Ic
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ngfr, Tnfrsf16
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet32a-Derived
methodSolution NMR
Primary referenceStructural basis of death domain signaling in the p75 neurotrophin receptor., Lin Z, Tann JY, Goh ET, Kelly C, Lim KB, Gao JF, Ibanez CF, Elife. 2015 Dec 8;4. pii: e11692. doi: 10.7554/eLife.11692. PMID:26646181
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (481 Kb) [Save to disk]
  • Biological Unit Coordinates (2n97.pdb1.gz) 48 Kb
  • CSU: Contacts of Structural Units for 2N97
  • Original NMR restraints for 2N97 from PDB
  • Retrieve 2N97 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2N97 from S2C, [Save to disk]
  • View 2N97 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2N97
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 2n97 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2n97_A] [2n97_B] [2n97]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2N97: [DEATH ] by SMART
  • Other resources with information on 2N97
  • Community annotation for 2N97 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science