2NN6 | Hydrolase Transferase | date | Oct 23, 2006 |
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title | Structure Of The Human Rna Exosome Composed Of Rrp41, Rrp45, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, And Rrp40 | ||||||||||||||||||||||||||||||||||||||||||
authors | C.D.Lima | ||||||||||||||||||||||||||||||||||||||||||
compound | source | ||||||||||||||||||||||||||||||||||||||||||
Molecule: Polymyositisscleroderma Autoantigen 1 Chain: A Synonym: Ribosomal Rna-Processing Protein 45, Rrp45, Pmscl Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Strain: Placental Cdna (Ambion, Inc) Gene: Pmscl1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Codonplus-Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Petduet-1 (Novagen) | ||||||||||||||||||||||||||||||||||||||||||
Molecule: Exosome Complex Exonuclease Rrp41 Chain: B Synonym: Ribosomal Rna-Processing Protein 41, Exosome Compo P12a; Ec: 3.1.13.- Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Strain: Placental Cdna (Ambion, Inc) Gene: Exosc4, Rrp41, Ski6 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Codonplus-Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Petduet-1 (Novagen) | ||||||||||||||||||||||||||||||||||||||||||
Molecule: Exosome Complex Exonuclease Rrp43 Chain: C Synonym: Ribosomal Rna-Processing Protein 43, Exosome Compo P9, Opa-Interacting Protein 2, Oip2; Ec: 3.1.13.- Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Strain: Placental Cdna (Ambion, Inc) Gene: Exosc8, Oip2, Rrp43 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Codonplus-Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Psmt3 (Smt3 Fusion) | ||||||||||||||||||||||||||||||||||||||||||
Molecule: Exosome Complex Exonuclease Rrp46 Chain: D Synonym: Ribosomal Rna-Processing Protein 46, Exosome Compo P12b, Chronic Myelogenous Leukemia Tumor Antigen 28; Ec: 3.1.13.- Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Strain: Placental Cdna (Ambion, Inc) Gene: Exosc5, Cml28, Rrp46 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Codonplus-Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Psmt3 (Smt3-Fusion) | ||||||||||||||||||||||||||||||||||||||||||
Molecule: Exosome Complex Exonuclease Rrp42 Chain: E Synonym: Ribosomal Rna-Processing Protein 42, Exosome Compo P8; Ec: 3.1.13.- Engineered: Yes Mutation: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Strain: Placental Cdna (Ambion, Inc) Gene: Exosc7, Kiaa0116, Rrp42 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Star Expression_system_vector_type: Plasmid Expression_system_plasmid: Prsfduet-1 (Novagen) | ||||||||||||||||||||||||||||||||||||||||||
Molecule: Exosome Component 6 Chain: F Synonym: Mtr3 Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Strain: Placental Cdna (Ambion, Inc) Gene: Exosc6 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Star Expression_system_vector_type: Plasmid Expression_system_plasmid: Prsfduet-1 (Novagen) | ||||||||||||||||||||||||||||||||||||||||||
Molecule: Exosome Complex Exonuclease Rrp40 Chain: G Synonym: Ribosomal Rna-Processing Protein 40, Exosome Compo P10; Ec: 3.1.13.- Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Strain: Placental Cdna (Ambion, Inc) Gene: Exosc3, Rrp40 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Codonplus-Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Prsfduet-1 (Novagen) | ||||||||||||||||||||||||||||||||||||||||||
Molecule: Exosome Complex Exonuclease Rrp4 Chain: H Synonym: Ribosomal Rna-Processing Protein 4, Exosome Compon Ec: 3.1.13.- Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Strain: Placental Cdna (Ambion, Inc) Gene: Exosc2, Rrp4 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Codonplus-Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Prsfduet-1 (Novagen) | ||||||||||||||||||||||||||||||||||||||||||
Molecule: 3'-5' Exoribonuclease Csl4 Homolog Chain: I Synonym: Exosome Component 1 Ec: 3.1.13.- Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Strain: Placental Cdna (Ambion, Inc) Gene: Exosc1, Csl4 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Codonplus-Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Prsfduet-1 (Novagen) | ||||||||||||||||||||||||||||||||||||||||||
symmetry | Space Group: P 4 3 2 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 3.35 Å | ||||||||||||||||||||||||||||||||||||||||
ligand | enzyme | Hydrolase E.C.3.1.13 BRENDA | |||||||||||||||||||||||||||||||||||||||||
note | 2NN6 (Molecule of the Month:pdb86) | ||||||||||||||||||||||||||||||||||||||||||
Gene Ontology |
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Primary reference | Reconstitution, activities, and structure of the eukaryotic RNA exosome., Liu Q, Greimann JC, Lima CD, Cell. 2006 Dec 15;127(6):1223-37. PMID:17174896 |
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