2NP8 Transferase date Oct 26, 2006
title Structural Basis For The Inhibition Of Aurora A Kinase By A Class Of High Affinity Disubstituted Pyrimidine Inhibitors
authors L.W.Tari, I.D.Hoffman, D.C.Bensen, M.J.Hunter, J.Nix, K.J.Nelson, D.E.Mcree, R.V.Swanson
compound source
Molecule: Serinethreonine-Protein Kinase 6
Chain: A
Synonym: Serinethreonine Kinase 15, Auroraipl1-Related Ki Aurora-Related Kinase 1, Hark1, Aurora-A, Breast-Tumor-Ampl Kinase;
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Aik
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28
symmetry Space Group: P 61 2 2
R_factor 0.244 R_Free 0.283
crystal
cell
length a length b length c angle alpha angle beta angle gamma
81.544 81.544 172.038 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.25 Å
ligand CC3, SO4 BindingDB enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for the inhibition of Aurora A kinase by a novel class of high affinity disubstituted pyrimidine inhibitors., Tari LW, Hoffman ID, Bensen DC, Hunter MJ, Nix J, Nelson KJ, McRee DE, Swanson RV, Bioorg Med Chem Lett. 2007 Feb 1;17(3):688-91. Epub 2006 Nov 2. PMID:17157005
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (2np8.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 2NP8
  • CSU: Contacts of Structural Units for 2NP8
  • Likely Quarternary Molecular Structure file(s) for 2NP8
  • Retrieve 2NP8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2NP8 from S2C, [Save to disk]
  • View 2NP8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2NP8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2NP8, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2np8] [2np8_A] [2np8_B]
  • SWISS-PROT database: [O14965]
  • Domain organization of [STK6_HUMAN] by SWISSPFAM
  • Domain found in 2NP8: [S_TKc ] by SMART
  • Other resources with information on 2NP8
  • Community annotation for 2NP8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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