2NPL Cell Adhesion date Oct 27, 2006
title Nmr Structure Of Card D2 Domain
authors S.Jiang, M.Caffrey
compound source
Molecule: Coxsackievirus And Adenovirus Receptor
Chain: X
Fragment: Domain Car 2
Synonym: Coxsackievirus B- Adenovirus Receptor; Hcar; Cvb3- Protein; Hcvadr;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cxadr, Car
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
methodSolution NMR
Primary referenceSolution structure of the coxsackievirus and adenovirus receptor domain 2., Jiang S, Caffrey M, Protein Sci. 2007 Mar;16(3):539-42. PMID:17322536
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk]
  • Biological Unit Coordinates (2npl.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 2NPL
  • Original NMR restraints for 2NPL from PDB
  • Retrieve 2NPL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2NPL from S2C, [Save to disk]
    • View 2NPL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2NPL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2NPL, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2npl] [2npl_X]
  • SWISS-PROT database: [P78310]
  • Domain organization of [CXAR_HUMAN] by SWISSPFAM
  • Domain found in 2NPL: [IGc2 ] by SMART
    • Other resources with information on 2NPL
  • Community annotation for 2NPL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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