2NPU Transferase date Oct 30, 2006
title The Solution Structure Of The Rapamycin-Binding Domain Of Mt
authors V.Veverka, T.Crabbe, I.Bird, G.Lennie, F.W.Muskett, R.J.Taylor, M.
compound source
Molecule: Fkbp12-Rapamycin Complex-Associated Protein
Chain: A
Fragment: Frb
Synonym: Fk506-Binding Protein 12-Rapamycin Complex-Associa Protein 1, Rapamycin Target Protein, Rapt1, Mammalian Targe Rapamycin, Mtor;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pproexhta
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural characterization of the interaction of mTOR with phosphatidic acid and a novel class of inhibitor: compelling evidence for a central role of the FRB domain in small molecule-mediated regulation of mTOR., Veverka V, Crabbe T, Bird I, Lennie G, Muskett FW, Taylor RJ, Carr MD, Oncogene. 2007 Aug 6;. PMID:17684489
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1014 Kb) [Save to disk]
  • Biological Unit Coordinates (2npu.pdb1.gz) 28 Kb
  • CSU: Contacts of Structural Units for 2NPU
  • Original NMR restraints for 2NPU from PDB
  • Retrieve 2NPU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2NPU from S2C, [Save to disk]
    • View 2NPU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2NPU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2NPU, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2npu_A] [2npu]
  • SWISS-PROT database: [P42345]
  • Domain organization of [FRAP_HUMAN] by SWISSPFAM
  • Domain found in 2NPU: [Rapamycin_bind ] by SMART
    • Other resources with information on 2NPU
  • Community annotation for 2NPU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science