2NVU | Protein Turnover, Ligase | date | Nov 13, 2006 |
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title | Structure Of Appbp1-Uba3~Nedd8-Nedd8-Mgatp-Ubc12(C111a), A T Ubiquitin-Like Protein Activation Complex | ||||||||||||||||||||||
authors | D.T.Huang, H.W.Hunt, M.Zhuang, M.D.Ohi, J.M.Holton, B.A.Schulman | ||||||||||||||||||||||
compound | source | ||||||||||||||||||||||
Molecule: Nedd8-Activating Enzyme E1 Regulatory Subunit Chain: A Synonym: Amyloid Protein-Binding Protein 1, Amyloid Beta Pr Protein-Binding Protein 1, 59 Kda, App-Bp1, Protooncogene P Hpp1; Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Appbp1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Gold Expression_system_vector_type: Plasmid Expression_system_vector: Bicistronic Pgex4t-3 Derivative Expression_system_plasmid: Pgex4t-1 | ||||||||||||||||||||||
Molecule: Maltose Binding Proteinnedd8-Activating Enzyme E Catalytic Subunit Chimera; Chain: B Fragment: Residues 33-463 Synonym: Mbp, Ubiquitin-Activating Enzyme 3, Nedd8-Activati E1c, Ubiquitin-Activating Enzyme E1c; Ec: 6.3.2.- Engineered: Yes Other_details: Fusion Protein. Maltose Binding Protein (Res 1001-1371), And The Nedd8-Activating Enzyme E1 Catalytic Su (Residues 2012-2442) Is From A Human Source; |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ube1c, Uba3 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Gold Expression_system_vector_type: Plasmid Expression_system_vector: Bicistronic Pgex4t-3 Derivative Expression_system_plasmid: Pgex4t-1 | ||||||||||||||||||||||
Molecule: Nedd8-Conjugating Enzyme Ubc12 Chain: C Synonym: Ubiquitin-Conjugating Enzyme E2 M, Nedd8 Protein L Nedd8 Carrier Protein; Ec: 6.3.2.- Engineered: Yes Mutation: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ube2m, Ubc12 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Gold Expression_system_vector_type: Plasmid Expression_system_vector: Bicistronic Pgex4t-3 Derivative Expression_system_plasmid: Pgex4t-1 | ||||||||||||||||||||||
Molecule: Nedd8 Chain: I, J Synonym: Ubiquitin-Like Protein Nedd8, Neddylin Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Nedd8 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Gold Expression_system_vector_type: Plasmid Expression_system_vector: Bicistronic Pgex4t-3 Derivative Expression_system_plasmid: Pgex4t-1 | ||||||||||||||||||||||
symmetry | Space Group: P 32 2 1 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 2.80 Å | ||||||||||||||||||||
ligand | ATP, MG, ZN | enzyme | Ligase E.C.6.3.2 BRENDA | ||||||||||||||||||||
Gene Ontology |
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Primary reference | Basis for a ubiquitin-like protein thioester switch toggling E1-E2 affinity., Huang DT, Hunt HW, Zhuang M, Ohi MD, Holton JM, Schulman BA, Nature. 2007 Jan 25;445(7126):394-8. Epub 2007 Jan 14. PMID:17220875 |
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