2NYB date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FE2, O enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A, C, D


Primary referenceHow can a single second sphere amino acid substitution cause reduction midpoint potential changes of hundreds of millivolts?, Yikilmaz E, Porta J, Grove LE, Vahedi-Faridi A, Bronshteyn Y, Brunold TC, Borgstahl GE, Miller AF, J Am Chem Soc. 2007 Aug 15;129(32):9927-40. Epub 2007 Jul 12. PMID:17628062
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (298 Kb) [Save to disk]
  • Biological Unit Coordinates (2nyb.pdb1.gz) 150 Kb
  • Biological Unit Coordinates (2nyb.pdb2.gz) 146 Kb
  • LPC: Ligand-Protein Contacts for 2NYB
  • CSU: Contacts of Structural Units for 2NYB
  • Likely Quarternary Molecular Structure file(s) for 2NYB
  • Structure Factors (2019 Kb)
  • Retrieve 2NYB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2NYB from S2C, [Save to disk]
  • Re-refined 2nyb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2NYB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2nyb] [2nyb_A] [2nyb_B] [2nyb_C] [2nyb_D]
  • SWISS-PROT database: [P0AGD3]

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