2NZ7 Crystal Structure Analysis of Caspase-recruitment Domain (CARD) of Nod1 date
authors Thiagarajan, S., Robbins, S.L., Dubas, R.L., Park, Y.C.
compound source
symmetry
R_factor
R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceMonomer/dimer transition of the caspase-recruitment domain of human Nod1., Srimathi T, Robbins SL, Dubas RL, Hasegawa M, Inohara N, Park YC, Biochemistry. 2008 Feb 5;47(5):1319-25. Epub 2008 Jan 11. PMID:18186648
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (2nz7.pdb1.gz) 33 Kb
  • CSU: Contacts of Structural Units for 2NZ7
  • Likely Quarternary Molecular Structure file(s) for 2NZ7
  • Structure Factors (405 Kb)
  • Retrieve 2NZ7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2NZ7 from S2C, [Save to disk]
  • Re-refined 2nz7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2NZ7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2NZ7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2NZ7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2nz7_A] [2nz7_B] [2nz7]
  • SWISS-PROT database: [Q9Y239]
  • Domain organization of [NOD1_HUMAN] by SWISSPFAM
  • Domain found in 2NZ7: [CARD ] by SMART
  • Other resources with information on 2NZ7
  • Community annotation for 2NZ7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science