2O13 Metal Binding Protein date Nov 28, 2006
title Solution Structure Of The C-Terminal Lim Domain Of Mlpcrp3
authors T.Schallus, C.Muhle-Goll, C.Edlich
compound source
Molecule: Muscle Lim Protein
Chain: A
Fragment: Lim Zinc-Binding Domain 2, Residues 119-176
Synonym: Cysteine And Glycine-Rich Protein 3, Cysteine- Rich Protein 3, Crp3, Lim Domain Protein, Cardiac;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Csrp3, Clp, Mlp
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 De3 Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet24
methodSolution NMR
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (333 Kb) [Save to disk]
  • LPC: Ligand-Protein Contacts for 2O13
  • CSU: Contacts of Structural Units for 2O13
  • Original NMR restraints for 2O13 from PDB
  • Retrieve 2O13 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2O13 from S2C, [Save to disk]
  • View 2O13 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2O13
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2O13, from MSDmotif at EBI
  • Fold representative 2o13 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2o13] [2o13_A]
  • SWISS-PROT database: [P50461]
  • Domain organization of [CSRP3_HUMAN] by SWISSPFAM
  • Domain found in 2O13: [LIM ] by SMART
  • Alignments of the sequence of 2O13 with the sequences similar proteins can be viewed for 2O13's classification [CSRP3_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [CSRP3_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 2O13
  • Community annotation for 2O13 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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