2O3D Rna Binding Protein date Dec 01, 2006
title Structure Of Human Sf2asf Rna Recognition Motif 2 (Rrm2)
authors A.M.Tintaru, G.M.Hautbergue, A.M.Hounslow, L.Y.Lian, C.J.Craven, S.A.Wilson
compound source
Molecule: Splicing Factor, Arginineserine-Rich 1
Chain: A
Fragment: Rna Recognition Motif 2 Of Sf2asf
Synonym: Pre-Mrna-Splicing Factor Sf2, P33 Subunit, Alterna Splicing Factor 1, Asf-1;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sfrs1, Asf, Sf2, Sf2p33
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and functional analysis of RNA and TAP binding to SF2/ASF., Tintaru AM, Hautbergue GM, Hounslow AM, Hung ML, Lian LY, Craven CJ, Wilson SA, EMBO Rep. 2007 Aug;8(8):756-62. Epub 2007 Jul 13. PMID:17668007
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (584 Kb) [Save to disk]
  • Biological Unit Coordinates (2o3d.pdb1.gz) 30 Kb
  • CSU: Contacts of Structural Units for 2O3D
  • Original NMR restraints for 2O3D from PDB
  • Retrieve 2O3D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2O3D from S2C, [Save to disk]
    • View 2O3D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2O3D
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2O3D, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2o3d] [2o3d_A]
  • SWISS-PROT database: [Q07955]
  • Domain organization of [SFRS1_HUMAN] by SWISSPFAM
  • Domain found in 2O3D: [RRM ] by SMART
    • Other resources with information on 2O3D
  • Community annotation for 2O3D at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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