2O88	Signaling Protein	date	Dec 12, 2006
title	Crystal Structure Of The N114a Mutant Of Abl-Sh3 Domain Comp A Designed High-Affinity Peptide Ligand: Implications For S Interactions
authors	A.Camara-Artigas
compound		source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Abl1 Chain: A, B Fragment: Sh3 Domain, Residues 64-121 Synonym: P150, C- Abl, Abelson Murine Leukemia Viral Oncoge 1; Ec: 2.7.10.2 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Strain: Pbat4 Gene: Abl1, Abl, Jtk7 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21 (De3)
Molecule: P41 Peptide Chain: C, D Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: P 21 21 21	R_factor 0.169 R_Free 0.213
crystal cell	length a length b length c angle alpha angle beta angle gamma 48.170 50.093 56.431 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.75 Å
ligand	ACE, SO4	enzyme	Transferase E.C.2.7.10.2 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystallization by capillary counter-diffusion and structure determination of the N114A mutant of the SH3 domain of Abl tyrosine kinase complexed with a high-affinity peptide ligand., Camara-Artigas A, Palencia A, Martinez JC, Luque I, Gavira JA, Garcia-Ruiz JM, Acta Crystallogr D Biol Crystallogr. 2007 May;63(Pt 5):646-52. Epub 2007, Apr 21. PMID:17452790

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (29 Kb) [Save to disk] Biological Unit Coordinates (2o88.pdb1.gz) 12 Kb Biological Unit Coordinates (2o88.pdb2.gz) 12 Kb LPC: Ligand-Protein Contacts for 2O88 CSU: Contacts of Structural Units for 2O88 Likely Quarternary Molecular Structure file(s) for 2O88 Structure Factors (98 Kb) Retrieve 2O88 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2O88 from S2C, [Save to disk] Re-refined 2o88 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 2O88

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2O88, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2o88_D] [2o88_C] [2o88_A] [2o88_B] [2o88] SWISS-PROT database: [P00519] Domain organization of [ABL1_HUMAN] by SWISSPFAM Domain found in 2O88: [SH3 ] by SMART

Other resources with information on 2O88

Community annotation for 2O88 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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