2OAX	Transcription	date	Dec 18, 2006
title	Crystal Structure Of The S810l Mutant Mineralocorticoid Receptor Associated With Sc9420
authors	J.Huyet, G.M.Pinon, M.R.Fay, M.E.Rafestin-Oblin, J.Fagart
compound		source
Molecule: Mineralocorticoid Receptor Chain: A, B, C, D, E, F Fragment: Ligand-Binding Domain Synonym: Mr Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Nr3c2, Mcr, Mlr Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 Codon Plus (De3) Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex Pmrlbdl810 Other_details: Expressed As Gst Fusion
symmetry	Space Group: P 32	R_factor 0.240 R_Free 0.263
crystal cell	length a length b length c angle alpha angle beta angle gamma 122.198 122.198 91.808 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.29 Å
ligand	SNL BindingDB	enzyme
Primary reference	Structural Basis of Spirolactone Recognition by the Mineralocorticoid Receptor., Huyet J, Pinon GM, Fay MR, Fagart J, Rafestin-Oblin ME, Mol Pharmacol. 2007 Jun 14;. PMID:17569793

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (249 Kb) [Save to disk] Biological Unit Coordinates (2oax.pdb1.gz) 43 Kb Biological Unit Coordinates (2oax.pdb2.gz) 43 Kb Biological Unit Coordinates (2oax.pdb3.gz) 44 Kb Biological Unit Coordinates (2oax.pdb4.gz) 43 Kb Biological Unit Coordinates (2oax.pdb5.gz) 42 Kb Biological Unit Coordinates (2oax.pdb6.gz) 44 Kb LPC: Ligand-Protein Contacts for 2OAX CSU: Contacts of Structural Units for 2OAX Likely Quarternary Molecular Structure file(s) for 2OAX Structure Factors (438 Kb) Retrieve 2OAX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OAX from S2C, [Save to disk] Re-refined 2oax structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2OAX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz. On AstexViewer, from MSD-EBI (viewer documentation). On RasMol (Install RasMol freeware) Here's help on how to use RasMol.

Visual 3D analysis of 2OAX

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 2OAX, from MSDmotif at EBI Fold representative 2oax from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

SWISS-PROT database: [P08235] Domain organization of [MCR_HUMAN] by SWISSPFAM Domain found in 2OAX: [HOLI ] by SMART Alignments of the sequence of 2OAX with the sequences similar proteins can be viewed for 2OAX's classification [MCR_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list. A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [MCR_HUMAN] at ProtoMap. Click on the Cluster number.

Other resources with information on 2OAX

Community annotation for 2OAX at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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