2OBZ Dna date Dec 20, 2006
title Crystal Structure Of The The Brominated Z-Dna Duplex D(Cgcg[
authors M.Schiltz, R.Sanishvili
compound source
Molecule: 5'-D(Cpgpcpgp(Bru)Pg)-3'
Chain: A, B
Engineered: Yes
Other_details: Brominated Z-Dna Duplex
 Synthetic: Yes
symmetry Space Group: P 21 21 21
R_factor 0.202 R_Free 0.213
crystal
cell
length a length b length c angle alpha angle beta angle gamma
17.339 32.074 44.341 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.10 Å
ligand BRU enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (14 Kb) [Save to disk]
  • Biological Unit Coordinates (2obz.pdb1.gz) 11 Kb
  • LPC: Ligand-Protein Contacts for 2OBZ
  • CSU: Contacts of Structural Units for 2OBZ
  • Likely Quarternary Molecular Structure file(s) for 2OBZ
  • Structure Factors (439 Kb)
  • Retrieve 2OBZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OBZ from S2C, [Save to disk]
  • Re-refined 2obz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2OBZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2OBZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2OBZ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2obz_B] [2obz] [2obz_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2OBZ
  • Community annotation for 2OBZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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