2OGA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, EDO, NA, PGU enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, D, A, C


Primary referenceMolecular architecture of DesV from Streptomyces venezuelae: a PLP-dependent transaminase involved in the biosynthesis of the unusual sugar desosamine., Burgie ES, Thoden JB, Holden HM, Protein Sci. 2007 May;16(5):887-96. PMID:17456741
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (254 Kb) [Save to disk]
  • Biological Unit Coordinates (2oga.pdb1.gz) 128 Kb
  • Biological Unit Coordinates (2oga.pdb2.gz) 124 Kb
  • Biological Unit Coordinates (2oga.pdb3.gz) 247 Kb
  • LPC: Ligand-Protein Contacts for 2OGA
  • CSU: Contacts of Structural Units for 2OGA
  • Likely Quarternary Molecular Structure file(s) for 2OGA
  • Structure Factors (766 Kb)
  • Retrieve 2OGA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OGA from S2C, [Save to disk]
  • Re-refined 2oga structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OGA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2oga] [2oga_A] [2oga_B] [2oga_C] [2oga_D]
  • SWISS-PROT database: [Q9ZGH4]

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