2OHF Hydrolase date Jan 10, 2007
title Crystal Structure Of Human Ola1 In Complex With Amppcp
authors T.Marquardt, D.Kostrewa
compound source
Molecule: Gtp-Binding Protein 9
Chain: A
Synonym: Protein Ola1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gtpbp9
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Blr [Prep4]
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe30
symmetry Space Group: C 2 2 21
R_factor 0.230 R_Free 0.288
crystal
cell
length a length b length c angle alpha angle beta angle gamma
141.253 159.831 55.129 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand ACP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHuman OLA1 defines an ATPase subfamily in the OBG family of GTP-binding proteins., Koller-Eichhorn R, Marquardt T, Gail R, Wittinghofer A, Kostrewa D, Kutay U, Kambach C, J Biol Chem. 2007 Apr 12;. PMID:17430889
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk]
  • Biological Unit Coordinates (2ohf.pdb1.gz) 56 Kb
  • LPC: Ligand-Protein Contacts for 2OHF
  • CSU: Contacts of Structural Units for 2OHF
  • Likely Quarternary Molecular Structure file(s) for 2OHF
  • Structure Factors (144 Kb)
  • Retrieve 2OHF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OHF from S2C, [Save to disk]
  • Re-refined 2ohf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OHF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2OHF
  • VIPERdb: visual, structural and computational analysis of 2OHF
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2OHF, from MSDmotif at EBI
  • Fold representative 2ohf from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ohf_A] [2ohf]
  • SWISS-PROT database: [Q9NTK5]
  • Domain organization of [OLA1_HUMAN] by SWISSPFAM
  • Other resources with information on 2OHF
  • Community annotation for 2OHF at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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