2OI0 Hydrolase date Jan 10, 2007
title Crystal Structure Analysis 0f The Tnf-A Coverting Enzyme (Tace) In Complexed With Aryl-Sulfonamide
authors Y.Wei, G.B.Rao, U.K.Bandarage
compound source
Molecule: Tnf- A Converting Enzyme (Tace)
Chain: A
Fragment: Tace Proteinase Domain (Residues 216-477)
Synonym: A Disintegrin And Metalloproteinase Domain 17, Tnf-Alpha-Converting Enzyme, Tnf-Alpha Convertase, Snake Venom-Like Protease, Cd156b Antigen;
Ec: 3.4.24.86
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tace
Expression_system_common: Insect Cells
Expression_system_vector_type: Virus
Expression_system_plasmid: Pbev11topo
symmetry Space Group: P 1 21 1
R_factor 0.210 R_Free 0.268
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.550 50.060 42.980 90.00 92.58 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand 283, ZN BindingDB enzyme Hydrolase E.C.3.4.24.86 BRENDA
Primary referenceNovel thiol-based TACE inhibitors: rational design, synthesis, and SAR of thiol-containing aryl sulfonamides., Govinda Rao B, Bandarage UK, Wang T, Come JH, Perola E, Wei Y, Tian SK, Saunders JO, Bioorg Med Chem Lett. 2007 Apr 15;17(8):2250-3. Epub 2007 Jan 26. PMID:17289381
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (2oi0.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 2OI0
  • CSU: Contacts of Structural Units for 2OI0
  • Likely Quarternary Molecular Structure file(s) for 2OI0
  • Retrieve 2OI0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OI0 from S2C, [Save to disk]
  • View 2OI0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2OI0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2OI0, from MSDmotif at EBI
  • Fold representative 2oi0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2oi0_A] [2oi0]
  • SWISS-PROT database: [P78536]
  • Domain organization of [ADA17_HUMAN] by SWISSPFAM
  • Other resources with information on 2OI0
  • Community annotation for 2OI0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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