2OLY Hormone date Jan 20, 2007
title Structure Of Human Insulin In Presence Of Urea At Ph 7.0
authors M.Norrman, G.Schluckebier
compound source
Molecule: Insulin A Chain
Chain: A, C, E, G, I, K
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Insulin B Chain
Chain: B, D, F, H, J, L

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: C 1 2 1
R_factor 0.184 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
100.240 60.150 62.920 90.00 116.21 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand CL, GOL, RCO, URE, ZN enzyme
Primary referenceCrystallographic characterization of two novel crystal forms of human insulin induced by chaotropic agents and a shift in pH., Norrman M, Schluckebier G, BMC Struct Biol. 2007 Dec 19;7(1):83. PMID:18093308
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (2oly.pdb1.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 2OLY
  • CSU: Contacts of Structural Units for 2OLY
  • Likely Quarternary Molecular Structure file(s) for 2OLY
  • Structure Factors (268 Kb)
  • Retrieve 2OLY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OLY from S2C, [Save to disk]
  • Re-refined 2oly structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OLY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2OLY
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2OLY, from MSDmotif at EBI
  • Fold representative 2oly from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2oly_I] [2oly_B] [2oly_K] [2oly_J] [2oly_C] [2oly_L] [2oly] [2oly_D] [2oly_H] [2oly_G] [2oly_F] [2oly_A] [2oly_E]
  • SWISS-PROT database: [P01308]
  • Domain organization of [INS_HUMAN] by SWISSPFAM
  • Domain found in 2OLY: [IlGF ] by SMART
  • Alignments of the sequence of 2OLY with the sequences similar proteins can be viewed for 2OLY's classification [INS_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [INS_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 2OLY
  • Community annotation for 2OLY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science