2OM0 Hormone date Jan 20, 2007
title Structure Of Human Insulin In Presence Of Urea At Ph 6.5
authors M.Norrman, G.Schluckebier
compound source
Molecule: Insulin A Chain
Chain: A, C, E, G, I, K, Q, S, U, X, 1, 3, a, c, e, g, I, k
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Insulin B Chain
Chain: B, D, F, H, J, L, R, T, V, Y, 2, 4, b, d, f, h, j, l

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: C 2 2 21
R_factor 0.184 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.936 219.318 223.674 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.05 Å
ligand CL, RCO, URE, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, T, Y, 2, V, L, J, B, H, 4, D, R


S, K, E, Q, 1, C, A, X, 3, I, G, U


Primary referenceCrystallographic characterization of two novel crystal forms of human insulin induced by chaotropic agents and a shift in pH., Norrman M, Schluckebier G, BMC Struct Biol. 2007 Dec 19;7(1):83. PMID:18093308
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (175 Kb) [Save to disk]
  • Biological Unit Coordinates (2om0.pdb1.gz) 58 Kb
  • Biological Unit Coordinates (2om0.pdb2.gz) 57 Kb
  • Biological Unit Coordinates (2om0.pdb3.gz) 56 Kb
  • LPC: Ligand-Protein Contacts for 2OM0
  • CSU: Contacts of Structural Units for 2OM0
  • Likely Quarternary Molecular Structure file(s) for 2OM0
  • Structure Factors (723 Kb)
  • Retrieve 2OM0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OM0 from S2C, [Save to disk]
  • Re-refined 2om0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OM0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2OM0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2OM0, from MSDmotif at EBI
  • Fold representative 2om0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2om0_X] [2om0_A] [2om0_V] [2om0_B] [2om0_j] [2om0_H] [2om0_c] [2om0_3] [2om0_1] [2om0_a] [2om0_G] [2om0_4] [2om0_R] [2om0_l] [2om0_C] [2om0_J] [2om0_Q] [2om0_I] [2om0_F] [2om0_k] [2om0_e] [2om0_g] [2om0_f] [2om0_K] [2om0_L] [2om0_h] [2om0_U] [2om0_Y] [2om0_b] [2om0_d] [2om0_D] [2om0_T] [2om0_i] [2om0_S] [2om0_2] [2om0_E] [2om0]
  • SWISS-PROT database: [P01308]
  • Domain organization of [INS_HUMAN] by SWISSPFAM
  • Domain found in 2OM0: [IlGF ] by SMART
  • Alignments of the sequence of 2OM0 with the sequences similar proteins can be viewed for 2OM0's classification [INS_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [INS_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 2OM0
  • Community annotation for 2OM0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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