2OMP LYQLEN peptide derived from human insulin chain A, residues 13-18 date
authors Ivanova, M.I., Sawaya, M.R., Eisenberg, D.
compound source
symmetry
R_factor
R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
Primary referenceAtomic structures of amyloid cross-beta spines reveal varied steric zippers., Sawaya MR, Sambashivan S, Nelson R, Ivanova MI, Sievers SA, Apostol MI, Thompson MJ, Balbirnie M, Wiltzius JJ, McFarlane HT, Madsen AO, Riekel C, Eisenberg D, Nature. 2007 May 24;447(7143):453-7. Epub 2007 Apr 29. PMID:17468747
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (6 Kb) [Save to disk]
  • Biological Unit Coordinates (2omp.pdb1.gz) 6 Kb
  • CSU: Contacts of Structural Units for 2OMP
  • Likely Quarternary Molecular Structure file(s) for 2OMP
  • Structure Factors (13 Kb)
  • Retrieve 2OMP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OMP from S2C, [Save to disk]
  • Re-refined 2omp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OMP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2OMP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2OMP, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2omp] [2omp_B] [2omp_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2OMP
  • Community annotation for 2OMP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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