2OO2 Structural Genomics, Unknown Function date Jan 25, 2007
title Crystal Structure Of Protein Af1782 From Archaeoglobus Fulgi Duf357
authors J.B.Bonanno, M.Rutter, K.T.Bain, J.Adams, V.Sridhar, L.Smyth, J.Fr S.Atwell, J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Resear For Structural Genomics (Nysgxrc)
compound source
Molecule: Hypothetical Protein Af_1782
Chain: A
Engineered: Yes
 Organism_scientific: Archaeoglobus Fulgidus Dsm 4304
Organism_taxid: 224325
Strain: Vc-16, Dsm 4304, Jcm 9628, Nbrc 100126
Atcc: 49558
Gene: Af_1782
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet
Expression_system_plasmid: Modified Pet26
symmetry Space Group: P 21 21 2
R_factor 0.240 R_Free 0.289
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.631 46.452 43.177 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
Gene AF
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (18 Kb) [Save to disk]
  • Biological Unit Coordinates (2oo2.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 2OO2
  • Likely Quarternary Molecular Structure file(s) for 2OO2
  • Structure Factors (59 Kb)
  • Retrieve 2OO2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OO2 from S2C, [Save to disk]
  • Re-refined 2oo2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2OO2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2OO2
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2OO2, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2oo2_A] [2oo2]
  • SWISS-PROT database: [O28492]
  • Domain organization of [O28492_ARCFU] by SWISSPFAM
    • Other resources with information on 2OO2
  • Community annotation for 2OO2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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