2OO5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAP, SO4, TXD enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A
  • NAD(P)+ transhydrogenase (B-...


    • Primary referenceStructures of the dI(2)dIII(1) Complex of Proton-Translocating Transhydrogenase with Bound, Inactive Analogues of NADH and NADPH Reveal Active Site Geometries(,)., Bhakta T, Whitehead SJ, Snaith JS, Dafforn TR, Wilkie J, Rajesh S, White SA, Jackson JB, Biochemistry. 2007 Mar 20;46(11):3304-18. Epub 2007 Feb 27. PMID:17323922
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (258 Kb) [Save to disk]
  • Biological Unit Coordinates (2oo5.pdb1.gz) 251 Kb
  • LPC: Ligand-Protein Contacts for 2OO5
  • CSU: Contacts of Structural Units for 2OO5
  • Likely Quarternary Molecular Structure file(s) for 2OO5
  • Structure Factors (225 Kb)
  • Retrieve 2OO5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OO5 from S2C, [Save to disk]
  • Re-refined 2oo5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2OO5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2OO5
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2OO5, from MSDmotif at EBI
  • Fold representative 2oo5 from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2oo5] [2oo5_A] [2oo5_B] [2oo5_C]
  • SWISS-PROT database: [P0C186] [P0C188]
  • Belongs to the proton-translocating transhydrogenase (pth) family according to TCDB.
  • Domain organization of [PNTAA_RHORU] [PNTB_RHORU] by SWISSPFAM
  • Domains found in 2OO5: [AlaDh_PNT_C] [AlaDh_PNT_N ] by SMART
    • Other resources with information on 2OO5
  • Community annotation for 2OO5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science