2OTJ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 13T, 1MA, CD, CL, K, MG, NA, OMG, OMU, PSU, UR3 enzyme
Gene
Ontology
ChainFunctionProcessComponent
1


2


3


A


B


C


D


E


F
  • ribonuclease P activity


    • G


    H


    I


    J


    K


    L


    M


    N


    O


    P


    Q


    R


    S


    T


    U


    V


    W


    X


    Y


    Z


    Primary referenceThe Structures of Antibiotics Bound to the E Site Region of the 50 S Ribosomal Subunit of Haloarcula marismortui: 13-Deoxytedanolide and Girodazole., Schroeder SJ, Blaha G, Tirado-Rives J, Steitz TA, Moore PB, J Mol Biol. 2007 Apr 13;367(5):1471-9. Epub 2007 Feb 7. PMID:17321546
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1962 Kb) [Save to disk]
  • Biological Unit Coordinates (2otj.pdb1.gz) 1931 Kb
  • LPC: Ligand-Protein Contacts for 2OTJ
  • CSU: Contacts of Structural Units for 2OTJ
  • Likely Quarternary Molecular Structure file(s) for 2OTJ
  • Structure Factors (4136 Kb)
  • Retrieve 2OTJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OTJ from S2C, [Save to disk]
  • Re-refined 2otj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2OTJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2otj] [2otj_0] [2otj_1] [2otj_2] [2otj_3] [2otj_9] [2otj_A] [2otj_B] [2otj_C] [2otj_D] [2otj_E] [2otj_F] [2otj_G] [2otj_H] [2otj_I] [2otj_J] [2otj_K] [2otj_L] [2otj_M] [2otj_N] [2otj_O] [2otj_P] [2otj_Q] [2otj_R] [2otj_S] [2otj_T] [2otj_U] [2otj_V] [2otj_W] [2otj_X] [2otj_Y] [2otj_Z]
  • SWISS-PROT database: [P60617] [P14122] [P29198] [P22450] [P60618] [P12737] [P12733] [P14123] [P14119] [P12734] [P10970] [P12732] [P14116] [P10972] [P10971] [P20276] [P14121] [P18138] [P12736] [P60619] [P32410] [P22452] [P20279] [P32411] [P12735] [P14124] [P14135] [P12743] [P15825]
  • Domains found in 2OTJ: [HhH1] [KOW] [RL11] [Ribosomal_L14] [Ribosomal_L15e] [Ribosomal_L19e] [Ribosomal_L2] [Ribosomal_L2_C] [Ribosomal_L31e] [Ribosomal_L32e] [TRASH ] by SMART

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