2OU7 Transferase date Feb 09, 2007
title Structure Of The Catalytic Domain Of Human Polo-Like Kinase
authors Y.H.Ding, M.Kothe, D.Kohls, S.Low
compound source
Molecule: Serinethreonine-Protein Kinase Plk1
Chain: A
Fragment: Catalytic Domain (Residues 13-345)
Synonym: Polo-Like Kinase 1, Plk-1, Serinethreonine-Protei 13, Stpk13;
Ec: 2.7.11.21
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Plk1, Plk
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_strain: Sf21
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 32 2 1
R_factor 0.203 R_Free 0.235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
65.958 65.958 154.045 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.40 Å
ligand ACT, ANP, MG, ZN enzyme Transferase E.C.2.7.11.21 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the catalytic domain of human polo-like kinase 1., Kothe M, Kohls D, Low S, Coli R, Cheng AC, Jacques SL, Johnson TL, Lewis C, Loh C, Nonomiya J, Sheils AL, Verdries KA, Wynn TA, Kuhn C, Ding YH, Biochemistry. 2007 May 22;46(20):5960-71. Epub 2007 Apr 27. PMID:17461553
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (2ou7.pdb1.gz) 51 Kb
  • Biological Unit Coordinates (2ou7.pdb2.gz) 101 Kb
  • LPC: Ligand-Protein Contacts for 2OU7
  • CSU: Contacts of Structural Units for 2OU7
  • Likely Quarternary Molecular Structure file(s) for 2OU7
  • Structure Factors (240 Kb)
  • Retrieve 2OU7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OU7 from S2C, [Save to disk]
  • Re-refined 2ou7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OU7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2OU7
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2OU7, from MSDmotif at EBI
  • Fold representative 2ou7 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ou7] [2ou7_A]
  • SWISS-PROT database: [P53350]
  • Domain organization of [PLK1_HUMAN] by SWISSPFAM
  • Domain found in 2OU7: [S_TKc ] by SMART
  • Other resources with information on 2OU7
  • Community annotation for 2OU7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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