2OUQ Hydrolase date Feb 12, 2007
title Crystal Structure Of Pde10a2 In Complex With Gmp
authors H.C.Wang, Y.D.Liu, J.Hou, M.Y.Zheng, H.Robinson
compound source
Molecule: Camp And Camp-Inhibited Cgmp 3',5'-Cyclic Phospho 10a;
Chain: A, B
Fragment: Catalytic Domain
Ec: 3.1.4.17
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Strain: Pde10a2
Gene: Pde10a
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 21 21 21
R_factor 0.213 R_Free 0.249
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.829 81.931 156.703 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand 5GP, MG, ZN enzyme Hydrolase E.C.3.1.4.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural insight into substrate specificity of phosphodiesterase 10., Wang H, Liu Y, Hou J, Zheng M, Robinson H, Ke H, Proc Natl Acad Sci U S A. 2007 Apr 3;104(14):5782-7. Epub 2007 Mar 26. PMID:17389385
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (114 Kb) [Save to disk]
  • Biological Unit Coordinates (2ouq.pdb1.gz) 58 Kb
  • Biological Unit Coordinates (2ouq.pdb2.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 2OUQ
  • CSU: Contacts of Structural Units for 2OUQ
  • Likely Quarternary Molecular Structure file(s) for 2OUQ
  • Structure Factors (558 Kb)
  • Retrieve 2OUQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OUQ from S2C, [Save to disk]
  • Re-refined 2ouq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OUQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2OUQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2OUQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ouq] [2ouq_B] [2ouq_A]
  • SWISS-PROT database: [Q9Y233]
  • Domain organization of [PDE10_HUMAN] by SWISSPFAM
  • Domain found in 2OUQ: [HDc ] by SMART
  • Other resources with information on 2OUQ
  • Community annotation for 2OUQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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