2OVH	Transcription	date	Feb 13, 2007
title	Progesterone Receptor With Bound Asoprisnil And A Peptide Fr Repressor Smrt
authors	K.P.Madauss, S.J.Deng, S.A.Short, E.L.Stewart, S.P.Williams
compound		source
Molecule: Progesterone Receptor Chain: A Fragment: Pr Lbd Synonym: Pr Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pgr, Nr3c3 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Phis Gst
Molecule: Smrt Peptide Chain: B Fragment: Smrt Peptide (Residues 2337-2352) Engineered: Yes		Synthetic: Yes Other_details: Smrt Peptide
symmetry	Space Group: P 32 2 1	R_factor 0.198 R_Free 0.222
crystal cell	length a length b length c angle alpha angle beta angle gamma 87.475 87.475 90.599 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	AS0 BindingDB	enzyme
Primary reference	A structural and in vitro characterization of asoprisnil: a selective progesterone receptor modulator., Madauss KP, Grygielko ET, Deng SJ, Sulpizio AC, Stanley TB, Wu C, Short SA, Thompson SK, Stewart EL, Laping NJ, Williams SP, Bray JD, Mol Endocrinol. 2007 May;21(5):1066-81. Epub 2007 Mar 13. PMID:17356170

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk] Biological Unit Coordinates (2ovh.pdb1.gz) 46 Kb Biological Unit Coordinates (2ovh.pdb2.gz) 90 Kb LPC: Ligand-Protein Contacts for 2OVH CSU: Contacts of Structural Units for 2OVH Likely Quarternary Molecular Structure file(s) for 2OVH Structure Factors (437 Kb) Retrieve 2OVH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OVH from S2C, [Save to disk] Re-refined 2ovh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2OVH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2OVH

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2OVH, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ovh] [2ovh_B] [2ovh_A] SWISS-PROT database: [P06401] Domain organization of [PRGR_HUMAN] by SWISSPFAM Domain found in 2OVH: [HOLI ] by SMART

Other resources with information on 2OVH

Community annotation for 2OVH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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