OCA Atlas for 2OYH

2OYH

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CA, FUC, NAG

enzyme

Gene
Ontology

Chain	Function	Process	Component
D, A
E, B
F, C

Primary reference

Probing the gamma2 Calcium-Binding Site: Studies with gammaD298,301A Fibrinogen Reveal Changes in the gamma294-301 Loop that Alter the Integrity of the "a" Polymerization Site(,)., Kostelansky MS, Lounes KC, Ping LF, Dickerson SK, Gorkun OV, Lord ST, Biochemistry. 2007 May 1;46(17):5114-23. Epub 2007 Apr 6. PMID:17411074

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (223 Kb) [Save to disk]

Biological Unit Coordinates (2oyh.pdb1.gz) 112 Kb

Biological Unit Coordinates (2oyh.pdb2.gz) 109 Kb

LPC: Ligand-Protein Contacts for 2OYH

CSU: Contacts of Structural Units for 2OYH

Likely Quarternary Molecular Structure file(s) for 2OYH

Structure Factors (803 Kb)

Retrieve 2OYH in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2OYH from S2C, [Save to disk]

Re-refined 2oyh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2OYH in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2oyh] [2oyh_A] [2oyh_B] [2oyh_C] [2oyh_D] [2oyh_E] [2oyh_F] [2oyh_G] [2oyh_H] [2oyh_I] [2oyh_J]

SWISS-PROT database: [P02671] [P02675] [P02679]

Domain found in 2OYH: [FBG ] by SMART

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