2P0C	Transferase	date	Feb 28, 2007
title	Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina
authors	J.R.Walker, X.Huang, P.J.Finerty Jr., J.Weigelt, M.Sundstrom, C.H.Arrowsmith, A.M.Edwards, A.Bochkarev, S.Dhe-Paganon, Struct Genomics Consortium (Sgc)
compound		source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Mer Chain: A, B Fragment: Catalytic Domain Synonym: C-Mer, Receptor Tyrosine Kinase Mertk Ec: 2.7.10.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Tissue: Peripheral Blood Leukocyte Gene: Mertk, Mer Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.204 R_Free 0.274
crystal cell	length a length b length c angle alpha angle beta angle gamma 52.470 90.057 69.253 90.00 102.44 90.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	ANP, BME, MG	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural insights into the inhibited states of the Mer receptor tyrosine kinase., Huang X, Finerty P Jr, Walker JR, Butler-Cole C, Vedadi M, Schapira M, Parker SA, Turk BE, Thompson DA, Dhe-Paganon S, J Struct Biol. 2009 Feb;165(2):88-96. Epub 2008 Nov 5. PMID:19028587

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (176 Kb) [Save to disk] Biological Unit Coordinates (2p0c.pdb1.gz) 85 Kb Biological Unit Coordinates (2p0c.pdb2.gz) 85 Kb LPC: Ligand-Protein Contacts for 2P0C CSU: Contacts of Structural Units for 2P0C Likely Quarternary Molecular Structure file(s) for 2P0C Structure Factors (323 Kb) Retrieve 2P0C in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2P0C from S2C, [Save to disk] Re-refined 2p0c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2P0C in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2P0C

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2P0C, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2p0c_B] [2p0c] [2p0c_A] SWISS-PROT database: [Q12866] Domain organization of [MERTK_HUMAN] by SWISSPFAM Domain found in 2P0C: [TyrKc ] by SMART

Other resources with information on 2P0C

Community annotation for 2P0C at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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