2P0N Structural Genomics, Unknown Function date Feb 28, 2007
title Nmb1532 Protein From Neisseria Meningitidis, Unknown Functio
authors J.Osipiuk, H.Li, M.Bargassa, A.Joachimiak, Midwest Center For St Genomics (Mcsg)
compound source
Molecule: Hypothetical Protein Nmb1532
Chain: A, B
Engineered: Yes
Organism_scientific: Neisseria Meningitidis
Organism_taxid: 122586
Strain: Mc58
Gene: Nmb1532
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: C 1 2 1
R_factor 0.168 R_Free 0.203
crystal
cell
length a length b length c angle alpha angle beta angle gamma
103.579 59.558 59.706 90.00 110.32 90.00
method X-Ray Diffractionresolution 1.41 Å
ligand BME, CL, GOL, MN, MSE enzyme
note 2P0N is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (135 Kb) [Save to disk]
  • Biological Unit Coordinates (2p0n.pdb1.gz) 66 Kb
  • Biological Unit Coordinates (2p0n.pdb2.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 2P0N
  • CSU: Contacts of Structural Units for 2P0N
  • Likely Quarternary Molecular Structure file(s) for 2P0N
  • Structure Factors (1240 Kb)
  • Retrieve 2P0N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2P0N from S2C, [Save to disk]
  • Re-refined 2p0n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2P0N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2P0N
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2P0N, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2p0n] [2p0n_A] [2p0n_B]
  • SWISS-PROT database: [Q9JYL1]
  • Domain organization of [Q9JYL1_NEIMB] by SWISSPFAM
  • Other resources with information on 2P0N
  • Community annotation for 2P0N at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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