2P4I Transferase date Mar 12, 2007
title Evolution Of A Highly Selective And Potent 2-(Pyridin-2-Yl)- Triazine Tie-2 Kinase Inhibitor
authors S.F.Bellon
compound source
Molecule: Angiopoietin-1 Receptor
Chain: A, B
Synonym: Tyrosine-Protein Kinase Receptor Tie-2, Htie2, Tyr Protein Kinase Receptor Tek, P140 Tek, Tunica Interna Endot Cell Kinase, Cd202b Antigen;
Ec: 2.7.10.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tek, Tie2
Expression_system: Trichoplusia Ni
Expression_system_common: Cabbage Looper
Expression_system_taxid: 7111
symmetry Space Group: P 21 21 21
R_factor 0.246 R_Free 0.303
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.262 63.189 175.571 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand MR9 BindingDB enzyme Transferase E.C.2.7.10.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceEvolution of a highly selective and potent 2-(pyridin-2-yl)-1,3,5-triazine tie-2 kinase inhibitor., Hodous BL, Geuns-Meyer SD, Hughes PE, Albrecht BK, Bellon S, Bready J, Caenepeel S, Cee VJ, Chaffee SC, Coxon A, Emery M, Fretland J, Gallant P, Gu Y, Hoffman D, Johnson RE, Kendall R, Kim JL, Long AM, Morrison M, Olivieri PR, Patel VF, Polverino A, Rose P, Tempest P, Wang L, Whittington DA, Zhao H, J Med Chem. 2007 Feb 22;50(4):611-26. Epub 2007 Jan 25. PMID:17253678
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk]
  • Biological Unit Coordinates (2p4i.pdb1.gz) 43 Kb
  • Biological Unit Coordinates (2p4i.pdb2.gz) 43 Kb
  • LPC: Ligand-Protein Contacts for 2P4I
  • CSU: Contacts of Structural Units for 2P4I
  • Likely Quarternary Molecular Structure file(s) for 2P4I
  • Retrieve 2P4I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2P4I from S2C, [Save to disk]
  • View 2P4I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2P4I
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2P4I, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2p4i_B] [2p4i] [2p4i_A]
  • SWISS-PROT database: [Q02763]
  • Domain organization of [TIE2_HUMAN] by SWISSPFAM
  • Domain found in 2P4I: [TyrKc ] by SMART
  • Other resources with information on 2P4I
  • Community annotation for 2P4I at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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