2P4J date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 23I BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, C, A, D


Primary referenceDesign, synthesis, and X-ray structure of potent memapsin 2 (beta-secretase) inhibitors with isophthalamide derivatives as the P2-P3-ligands., Ghosh AK, Kumaragurubaran N, Hong L, Kulkarni SS, Xu X, Chang W, Weerasena V, Turner R, Koelsch G, Bilcer G, Tang J, J Med Chem. 2007 May 17;50(10):2399-407. Epub 2007 Apr 14. PMID:17432843
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (261 Kb) [Save to disk]
  • Biological Unit Coordinates (2p4j.pdb1.gz) 67 Kb
  • Biological Unit Coordinates (2p4j.pdb2.gz) 68 Kb
  • Biological Unit Coordinates (2p4j.pdb3.gz) 68 Kb
  • Biological Unit Coordinates (2p4j.pdb4.gz) 66 Kb
  • LPC: Ligand-Protein Contacts for 2P4J
  • CSU: Contacts of Structural Units for 2P4J
  • Likely Quarternary Molecular Structure file(s) for 2P4J
  • Structure Factors (989 Kb)
  • Retrieve 2P4J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2P4J from S2C, [Save to disk]
  • Re-refined 2p4j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2P4J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2p4j] [2p4j_A] [2p4j_B] [2p4j_C] [2p4j_D]
  • SWISS-PROT database: [P56817]
  • Belongs to the β-amyloid cleaving enzyme (bace1) family according to TCDB.

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