2PBN	Hydrolase	date	Mar 28, 2007
title	Crystal Structure Of The Human Tyrosine Receptor Phosphate G
authors	J.B.Bonanno, J.Freeman, K.T.Bain, C.Reyes, L.Pelletier, X.Jin, D.S S.Wasserman, J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Res Center For Structural Genomics (Nysgxrc)
compound		source
Molecule: Receptor-Type Tyrosine-Protein Phosphatase Gamma Chain: A Fragment: Tyrosine-Protein Phosphatase 1 Synonym: Protein-Tyrosine Phosphatase Gamma, R-Ptp-Gamma Ec: 3.1.3.48 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ptprg Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_vector: Pet Expression_system_plasmid: Modified Pet26
symmetry	Space Group: P 32 2 1	R_factor 0.208 R_Free 0.234
crystal cell	length a length b length c angle alpha angle beta angle gamma 107.338 107.338 67.757 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	SO4	enzyme	Hydrolase E.C.3.1.3.48 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structural genomics of protein phosphatases., Almo SC, Bonanno JB, Sauder JM, Emtage S, Dilorenzo TP, Malashkevich V, Wasserman SR, Swaminathan S, Eswaramoorthy S, Agarwal R, Kumaran D, Madegowda M, Ragumani S, Patskovsky Y, Alvarado J, Ramagopal UA, Faber-Barata J, Chance MR, Sali A, Fiser A, Zhang ZY, Lawrence DS, Burley SK, J Struct Funct Genomics. 2007 Sep;8(2-3):121-40. Epub 2007 Dec 5. PMID:18058037

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk] Biological Unit Coordinates (2pbn.pdb1.gz) 52 Kb LPC: Ligand-Protein Contacts for 2PBN CSU: Contacts of Structural Units for 2PBN Likely Quarternary Molecular Structure file(s) for 2PBN Structure Factors (337 Kb) Retrieve 2PBN in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2PBN from S2C, [Save to disk] Re-refined 2pbn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2PBN in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2PBN

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2PBN, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2pbn_A] [2pbn] SWISS-PROT database: [P23470] Domain organization of [PTPRG_HUMAN] by SWISSPFAM Domain found in 2PBN: [PTPc ] by SMART

Other resources with information on 2PBN

Community annotation for 2PBN at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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