2PE3 Hydrolase date Apr 02, 2007
title Crystal Structure Of Frv Operon Protein Frvx (Ph1821)From Py Horikoshii Ot3
authors J.Jeyakanthan, S.P.Kanaujia, Z.A.Rafi, K.Sekar, E.Inagakai, A.Ebi S.Kuramitsu, A.Shinkai, Y.Shiro, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: 354aa Long Hypothetical Operon Protein Frv
Chain: A, B, C, D
Synonym: Frv Operon Protein Frvx
Engineered: Yes
Organism_scientific: Pyrococcus Horikoshii
Organism_taxid: 70601
Strain: Ot3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl-21 Condon Plus (De3)-Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11a
symmetry Space Group: H 3
R_factor 0.166 R_Free 0.197
crystal
cell
length a length b length c angle alpha angle beta angle gamma
125.608 125.608 277.323 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (219 Kb) [Save to disk]
  • Biological Unit Coordinates (2pe3.pdb1.gz) 637 Kb
  • CSU: Contacts of Structural Units for 2PE3
  • Likely Quarternary Molecular Structure file(s) for 2PE3
  • Structure Factors (1676 Kb)
  • Retrieve 2PE3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PE3 from S2C, [Save to disk]
  • Re-refined 2pe3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2PE3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2PE3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2PE3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2pe3] [2pe3_D] [2pe3_B] [2pe3_C] [2pe3_A]
  • SWISS-PROT database: [O59485]
  • Domain organization of [O59485_PYRHO] by SWISSPFAM
  • Other resources with information on 2PE3
  • Community annotation for 2PE3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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