2PHB date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 230, CA BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe discovery of (2R,4R)-N-(4-chlorophenyl)-N- (2-fluoro-4-(2-oxopyridin-1(2H)-yl)phenyl)-4-methoxypyrrolidine-1,2-dicarb oxamide (PD 0348292), an orally efficacious factor Xa inhibitor., Kohrt JT, Bigge CF, Bryant JW, Casimiro-Garcia A, Chi L, Cody WL, Dahring T, Dudley DA, Filipski KJ, Haarer S, Heemstra R, Janiczek N, Narasimhan L, McClanahan T, Peterson JT, Sahasrabudhe V, Schaum R, Van Huis CA, Welch KM, Zhang E, Leadley RJ, Edmunds JJ, Chem Biol Drug Des. 2007 Aug;70(2):100-12. PMID:17683371
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (2phb.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 2PHB
  • CSU: Contacts of Structural Units for 2PHB
  • Likely Quarternary Molecular Structure file(s) for 2PHB
  • Structure Factors (135 Kb)
  • Retrieve 2PHB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PHB from S2C, [Save to disk]
  • Re-refined 2phb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2PHB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2phb] [2phb_B] [2phb_A]
  • SWISS-PROT database: [P00742]
  • Domains found in 2PHB: [EGF] [Tryp_SPc ] by SMART

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