2PLD	Phosphoric Diester Hydrolase	date	Aug 19, 1994
title	Nuclear Magnetic Resonance Structure Of An Sh2 Domain Of Phospholipase C-Gamma1 Complexed With A High Affinity Binding Peptide
authors	S.M.Pascal, A.U.Singer, G.Gish, T.Yamazaki, S.E.Shoelson, T.Pawson, L.E.Kay, J.D.Forman-Kay
compound		source
Molecule: Phospholipase C Gamma-1, C-Terminal Sh2 Domain Chain: A Ec: 3.1.4.11 Engineered: Yes		Organism_scientific: Bos Taurus Organism_common: Cattle Organism_taxid: 9913
Molecule: Phosphopeptide From Pdgf Chain: B Engineered: Yes		Organism_scientific: Bos Taurus Organism_common: Cattle Organism_taxid: 9913
method	Solution NMR
ligand	PTR	enzyme	Hydrolase E.C.3.1.4.11 BRENDA
related structures	by homologous chain: 2PLE
Primary reference	Nuclear magnetic resonance structure of an SH2 domain of phospholipase C-gamma 1 complexed with a high affinity binding peptide., Pascal SM, Singer AU, Gish G, Yamazaki T, Shoelson SE, Pawson T, Kay LE, Forman-Kay JD, Cell 1994 May 6;77(3):461-72. PMID:8181064

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk] LPC: Ligand-Protein Contacts for 2PLD CSU: Contacts of Structural Units for 2PLD Retrieve 2PLD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2PLD from S2C, [Save to disk]

View 2PLD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2PLD

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 2PLD, from MSDmotif at EBI Genome occurence of 2PLD's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d2plda_, region A [Jmol] [rasmolscript] [script source] Fold representative 2pld from FSSP and Dali (Families of Structurally Similar Proteins) Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2pld_B] [2pld] [2pld_A] SWISS-PROT database: [P08487] Domain organization of [PLCG1_BOVIN] by SWISSPFAM Domain found in 2PLD: [SH2 ] by SMART Alignments of the sequence of 2PLD with the sequences similar proteins can be viewed for 2PLD's classification [PLCG1_BOVIN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list. A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [PLCG1_BOVIN] at ProtoMap. Click on the Cluster number.

Other resources with information on 2PLD

Community annotation for 2PLD at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 2PLD from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014 Bioinformatics Unit Weizmann Institute of Science

---