2PLG Structural Genomics, Unknown Function date Apr 19, 2007
title Crystal Structure Of T110839 Protein From Synechococcus Elon
authors M.Madegowda, S.Eswaramoorthy, S.K.Burley, S.Swaminathan, New Yor Research Center For Structural Genomics (Nysgxrc)
compound source
Molecule: Tll0839 Protein
Chain: A, B
Engineered: Yes
 Organism_scientific: Synechococcus Elongatus
Organism_taxid: 32046
Strain: Bp-1
Gene: Tll0839
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Psgx3(Bc)
symmetry Space Group: P 41 21 2
R_factor 0.216 R_Free 0.237
crystal
cell
length a length b length c angle alpha angle beta angle gamma
98.185 98.185 144.679 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand MSE enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (2plg.pdb1.gz) 48 Kb
  • Biological Unit Coordinates (2plg.pdb2.gz) 95 Kb
  • Biological Unit Coordinates (2plg.pdb3.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 2PLG
  • CSU: Contacts of Structural Units for 2PLG
  • Likely Quarternary Molecular Structure file(s) for 2PLG
  • Structure Factors (185 Kb)
  • Retrieve 2PLG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PLG from S2C, [Save to disk]
  • Re-refined 2plg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2PLG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2PLG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2PLG, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2plg] [2plg_A] [2plg_B]
  • SWISS-PROT database: [Q8DKM0]
  • Domain organization of [Q8DKM0_THEEB] by SWISSPFAM
    • Other resources with information on 2PLG
  • Community annotation for 2PLG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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