2PMR Structural Genomics, Unknown Function date Apr 23, 2007
title Crystal Structure Of A Protein Of Unknown Function From Methanobacterium Thermoautotrophicum
authors J.B.Bonanno, J.Freeman, K.T.Bain, B.Wu, S.Ozyurt, D.Smith, S.Wasse J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Research Center Structural Genomics (Nysgxrc)
compound source
Molecule: Uncharacterized Protein
Chain: A
Engineered: Yes
 Organism_scientific: Methanothermobacter Thermautotrophicus
Organism_taxid: 187420
Strain: Delta H
Gene: Mth1690
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet
Expression_system_plasmid: Modified Pet26
symmetry Space Group: C 2 2 21
R_factor 0.175 R_Free 0.191
crystal
cell
length a length b length c angle alpha angle beta angle gamma
37.370 94.936 46.258 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.32 Å
note 2PMR is a representative structure
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (2pmr.pdb1.gz) 55 Kb
  • CSU: Contacts of Structural Units for 2PMR
  • Likely Quarternary Molecular Structure file(s) for 2PMR
  • Structure Factors (138 Kb)
  • Retrieve 2PMR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PMR from S2C, [Save to disk]
  • Re-refined 2pmr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2PMR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2PMR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2PMR, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2pmr_A] [2pmr]
  • SWISS-PROT database: [O27725]
  • Domain organization of [O27725_METTH] by SWISSPFAM
    • Other resources with information on 2PMR
  • Community annotation for 2PMR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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