OCA Atlas for 2PNO

2PNO

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

GSH, LMT

enzyme

Gene
Ontology

Chain	Function	Process	Component
J, K, C, F, B, H, G, I, E, A, L, D	glutathione peroxidase activ... enzyme activator activity

Primary reference

Crystal structure of a human membrane protein involved in cysteinyl leukotriene biosynthesis., Ago H, Kanaoka Y, Irikura D, Lam BK, Shimamura T, Austen KF, Miyano M, Nature. 2007 Aug 2;448(7153):609-12. Epub 2007 Jul 15. PMID:17632548

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (304 Kb) [Save to disk]

Biological Unit Coordinates (2pno.pdb1.gz) 78 Kb

Biological Unit Coordinates (2pno.pdb2.gz) 76 Kb

Biological Unit Coordinates (2pno.pdb3.gz) 72 Kb

Biological Unit Coordinates (2pno.pdb4.gz) 72 Kb

LPC: Ligand-Protein Contacts for 2PNO

CSU: Contacts of Structural Units for 2PNO

Structure Factors (423 Kb)

Retrieve 2PNO in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2PNO from S2C, [Save to disk]

Re-refined 2pno structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2PNO in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2pno] [2pno_A] [2pno_B] [2pno_C] [2pno_D] [2pno_E] [2pno_F] [2pno_G] [2pno_H] [2pno_I] [2pno_J] [2pno_K] [2pno_L]

SWISS-PROT database: [Q16873]

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