2PON Apoptosis Inhibitor date Apr 27, 2007
title Solution Structure Of The Bcl-Xlbeclin-1 Complex
authors W.Feng, S.Huang, H.Wu, M.Zhang
compound source
Molecule: Beclin-1
Chain: A
Synonym: Coiled-Coil Myosin-Like Bcl2-Interacting Protein Gt197;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Becn1, Gt197
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pet32a

Molecule: Apoptosis Regulator Bcl-X
Chain: B
Fragment: Deletion Of 45-84
Synonym: Bcl-2-Like 1 Protein
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bcl2l1, Bcl2l, Bclx
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pet32a
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceMolecular Basis of Bcl-xL's Target Recognition Versatility Revealed by the Structure of Bcl-xL in Complex with the BH3 Domain of Beclin-1., Feng W, Huang S, Wu H, Zhang M, J Mol Biol. 2007 Sep 7;372(1):223-35. Epub 2007 Jun 30. PMID:17659302
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (934 Kb) [Save to disk]
  • Biological Unit Coordinates (2pon.pdb1.gz) 46 Kb
  • CSU: Contacts of Structural Units for 2PON
  • Original NMR restraints for 2PON from PDB
  • Retrieve 2PON in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PON from S2C, [Save to disk]
  • View 2PON in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2PON
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2PON, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2pon_B] [2pon] [2pon_A]
  • SWISS-PROT database: [Q07817] [Q14457]
  • Belongs to the bcl-2 (bcl-2) family according to TCDB.
  • Domain organization of [B2CL1_HUMAN] [BECN1_HUMAN] by SWISSPFAM
  • Domains found in 2PON: [BCL] [BH4 ] by SMART
  • Other resources with information on 2PON
  • Community annotation for 2PON at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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