2PRT	Transcription Dna	date	May 04, 2007
title	Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Bound To Dna
authors	R.Stoll, B.M.Lee, E.W.Debler, J.H.Laity, I.A.Wilson, H.J.Dyson, P.
compound		source
Molecule: Dna (5'-D(Cpgpcpgpgpgpgpgpcpgptpcptp Chain: B Engineered: Yes		Synthetic: Yes
Molecule: Dna (5'-D(Cpapgpapcpgpcpcpcpcpcpgpcp Chain: C Engineered: Yes		Synthetic: Yes
Molecule: Wilms Tumor 1 Chain: A Fragment: Residues 174-291 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Wt1 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 61 2 2	R_factor 0.236 R_Free 0.277
crystal cell	length a length b length c angle alpha angle beta angle gamma 86.879 86.879 171.202 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	3.15 Å
ligand	ZN	enzyme
Primary reference	Structure of the Wilms tumor suppressor protein zinc finger domain bound to DNA., Stoll R, Lee BM, Debler EW, Laity JH, Wilson IA, Dyson HJ, Wright PE, J Mol Biol. 2007 Oct 5;372(5):1227-45. Epub 2007 Jul 21. PMID:17716689

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk] Biological Unit Coordinates (2prt.pdb1.gz) 28 Kb LPC: Ligand-Protein Contacts for 2PRT CSU: Contacts of Structural Units for 2PRT Likely Quarternary Molecular Structure file(s) for 2PRT Retrieve 2PRT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2PRT from S2C, [Save to disk]

View 2PRT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2PRT

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2PRT, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2prt] [2prt_C] [2prt_A] [2prt_B] SWISS-PROT database: [P19544] Domain organization of [WT1_HUMAN] by SWISSPFAM Domain found in 2PRT: [ZnF_C2H2 ] by SMART

Other resources with information on 2PRT

Community annotation for 2PRT at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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